Pseudomonas aeruginosa PAO1, PA3705 (wspD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chemotaxis Other PAO1 genes in this class
Motility & Attachment Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Chemosensory ECO:0000037
not_recorded
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Chemotaxis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 84 215 1.4E-15
PANTHER PTHR22617 CHEMOTAXIS SENSOR HISTIDINE KINASE-RELATED IPR039315 Chemotaxis protein CheW 72 226 2.1E-22
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 80 224 1.16E-21
Gene3D G3DSA:2.40.50.180 - - - 101 216 1.4E-15
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 83 223 6.7E-21
SMART SM00260 chew_2 IPR002545 CheW-like domain 78 221 3.3E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.