Strain |
Pseudomonas mendocina NK-01
GCF_000204295.1|latest |
Locus Tag |
MDS_1523
|
Name |
|
Replicon | chromosome |
Genomic location | 1663133 - 1663714 (+ strand) |
RefSeq | YP_004379306.1 |
GI | 330502437 |
Entrez | 10456304 |
INSDC | AEB57554.1 |
NCBI Locus Tag | MDS_1523 |
UniParc | UPI0000E77956 |
UniProtKB Acc | F4DY14 |
UniProtKB ID | F4DY14_PSEMN |
UniRef100 | UniRef100_F4DY14 |
UniRef50 | UniRef50_D0ZSY9 |
UniRef90 | UniRef90_Q06198 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor AlgU
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -5.83 |
Kyte-Doolittle Hydrophobicity Value | -0.456 |
Molecular Weight (kDa) | 22.2 |
Isoelectric Point (pI) | 5.14 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6IN7 | TRANSCRIPTION | 10/24/18 | Crystal structure of AlgU in complex with MucA(cyto) | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.96 | X-RAY DIFFRACTION | 90.7 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 492 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000736 (532 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: MDS_1523
Search term: RNA polymerase sigma factor AlgU
|