Pseudomonas protegens Pf-5, PFL_5948

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00721
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.479.30:FF:000004 Putative membrane protease family, stomatin - - 58 168 4.4E-34
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 173 194 1.4E-30
Pfam PF16200 C-terminal region of band_7 IPR032435 STML2-like, C-terminal extension 240 299 2.0E-9
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 154 172 1.4E-30
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 75 96 1.4E-30
SMART SM00244 PHB_4 IPR001107 Band 7 domain 20 178 4.4E-57
Pfam PF01145 SPFH domain / Band 7 family IPR001107 Band 7 domain 24 193 3.4E-33
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 110 127 1.4E-30
Gene3D G3DSA:3.30.479.30 Band 7 domain IPR036013 Band 7/SPFH domain superfamily 48 180 2.4E-36
PRINTS PR00721 Stomatin signature IPR001972 Stomatin/HflK family 130 153 1.4E-30
SUPERFAMILY SSF117892 Band 7/SPFH domain IPR036013 Band 7/SPFH domain superfamily 51 185 1.44E-39
PANTHER PTHR43327 STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL - - 19 286 5.5E-67
CDD cd08829 SPFH_paraslipin - - 60 168 7.51381E-54

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.