Pseudomonas aeruginosa PAO1, PA5371
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| OxyR binding site | 6046633 | 6046647 | + |
ECO:0000314
direct assay evidence used in manual assertion |
22275523 | Details |
| Shine-Dalgarno sequence | 6046639 | 6046641 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details | |
| Shine-Dalgarno sequence | 6046901 | 6046904 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GAACGCCGGC-N4-GCCGGCGTTC | 6047325 | 6047348 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1490 | 6047322 | 6047351 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1491 | 6047325 | 6047348 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 1493 | 6047328 | 6047345 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |